Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859346.1_cds_XP_016514289.1_26756
CDS Infomation

[gene=LOC107831076] [db_xref=GeneID:107831076] [protein=DEAD-box ATP-dependent RNA helicase 32-like] [protein_id=XP_016514289.1] [location=complement(join(81693..82030,82557..82720,83028..83446,83571..83726,83857..84048,84341..84664,85478..85753,88019..88393))] [gbkey=CDS]
Sequence

ATGAGAAAGCACACGCCTAAATCACGTAAAGCTAAAATACAGAGCCGCTTATCAGAGGTT
CATGAAATTGAACTTCTGGAAGCATGGATAGAATCGGGTAAACCCGAATCCGGTTCCAAC
CCGCTATCACTTGAGCCATTACCACACAAAGCTCCGGTTGGATGCCTTCCTGATGGTTCG
TTCTCTAGGTACGCCGGTTGTGACAGGTTCAGCCAGTTGCCGGTTAGTAAGAAAACTAAG
GATGGGTTAATTGATTGCAAATTCAAAACCATGACTGACATTCAAAGGGCTTCTCTACCA
CACTCTCTTTGTGGCCGTGACATACTTGGGGCTGCGAAAACTGGTTCCGGAAAGACATTA
GCTTTCGTAATTCCGGTGTTAGAGAAATTGTATAAAGCTCGATGGGGAGATGAGGATGGT
GTTGGATGCATCATAATGTCTCCCACAAGGGAGTTAGCAGGGCAACTTTTTGACGTACTG
AAATCTGTTGGGAAGCATCACGGCTTTAGTGCTGGCCTTCTAATTGGTGGCCGCAAAGAT
GTTGACACTGAAAAAGAGCATGTTAATTCGCTGAACATCCTGGTCTGCACCCCTGGCCGG
CTTCTTCAGCATATGGATGAGACACCAAATTTTGATTGTTCACAACTTCAGGTTTTAGTT
CTTGATGAAGCAGATCGTATTCTTGATGTGGGGTTTAAGAGGGAATTAAATGCAATCATA
TCACAATTGCCTAAACATAGGCAGACCTTGTTGTTTTCAGCAACTCAGACGAAGTCTGTT
CAAGATCTGGCAAGGCTCAGTCTGAAAGACCCCGAATATTTGGGTGTGCACGAGGAGTCT
GATACTGCAACTCCCAACCGCTTACAACAAACAGCAATGCTTGTTCCTCTCGATAAGAAA
TTGGACATGTTATGGAGTTTTATAAAGGCACATCTTAATTCAAGGATATTGGTTTTCCTA
TCAAGCTGCAAGCAGGTAAAATTTGTATTTGAAGCTTTCAAAAAACTCCGTCCTGGAATT
CCCCTCAAATGTCTTCATGGAAGGATGAAGCAAGATAGAAGGATGGGAATTTACTCCCAA
TTTTGTGAACAACGTTCTGTTTTGTTCTCCACTGATGTTGCTTCAAGGGGGCTTGATTTT
AATAAGGCGGTTGATTGGGTTGTCCAGGTGGACTGTCCCGAAGATTGTGCCGCTTACATA
CACAGAGTTGGCCGCACTGCTCGATACCTTTCAGGGGGAAGATCTCTTTTATTCGTGATG
CCATCTGAGATGAAAATGCTTGAAAAATTGGAAGAGAAAAAGATTCCCCTTCGAGTTATC
AAGGCAAATGAAAAGAGGATACAGTCTGTCTCCGATCTACTTGCTTCTTTATTGGTCAAG
TACCCTGACCTACAGCATCTGTCTCAAAGGGCTTTTGTGACATACTTGAAGTCCATACAC
AAACAGAGAGATAAAGAGATCTTTGATGTTACAAAACTTCCAATTGATGAATTCTCTGCT
TCGTTGGGTCTTCCTATGACTCCAAAAATCCGCTTTCTGAAACAGAAGCTCAAAGGGAAG
ACAGTGTCTGAAGCATTATCTCTCCTGCCAGATGACACAAGCAATGACAATTTGTTGGAA
CTTCCAATTAAGAAGCCTGATACAGGTAAATCAGAGGGAGAGGAAGTGGAGGAAGACCTC
CTTCTAGCTAAGGAGACACAAGAAGTAGGAGAACTCAAAATTAACAGCAAAGGAGATGAT
ATGCCGGCCACTAGAGTTTTGAAGAAAAAGAAACTAAAGATCAATGTCCACAGACCTGTA
GGGACAAGGGTTGTGTTTGATGAGGAAGGAAACACTTTACCACCTCTTGCAAGATTAGCC
GACACAAGCGGTGGTGCTGACTCTGTGCAGCTTAACAAAGAAAAAGTAAATCACAGATAT
GCTGAGTTGAGAAAGAACTTGAAGTTGGTCGACAAGGAAGACAAGGATTTGGACCGCAAA
CGTCTCAAAGAAAAACGAATCAAGGAGAAGATGAAGTATAAGAGAGGTAGAGAGGAAGAG
GAAGAGGAAGATGAAGAACTCTCCGGGTCAGACGGGGAACTCTCCGGAGGTAGAGTCAAC
AAGAAAACCAAGATTTTTGACAGTGATGACGATGATGGCGAGAAACCAAAGGACATGGCT
AAAGAGGGTATTGCTGCTGACGCTATATCTGTGGCAGAGCAAGAAGAGTTGGCTCTGAAG
TTGCTAAGTTCTATGAACTCGTAA

Peptide Sequence

PEP ID

XP_016514289.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Nicotiana tabacum]
Sequence

MRKHTPKSRKAKIQSRLSEVHEIELLEAWIESGKPESGSNPLSLEPLPHKAPVGCLPDGS
FSRYAGCDRFSQLPVSKKTKDGLIDCKFKTMTDIQRASLPHSLCGRDILGAAKTGSGKTL
AFVIPVLEKLYKARWGDEDGVGCIIMSPTRELAGQLFDVLKSVGKHHGFSAGLLIGGRKD
VDTEKEHVNSLNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKRELNAII
SQLPKHRQTLLFSATQTKSVQDLARLSLKDPEYLGVHEESDTATPNRLQQTAMLVPLDKK
LDMLWSFIKAHLNSRILVFLSSCKQVKFVFEAFKKLRPGIPLKCLHGRMKQDRRMGIYSQ
FCEQRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDCAAYIHRVGRTARYLSGGRSLLFVM
PSEMKMLEKLEEKKIPLRVIKANEKRIQSVSDLLASLLVKYPDLQHLSQRAFVTYLKSIH
KQRDKEIFDVTKLPIDEFSASLGLPMTPKIRFLKQKLKGKTVSEALSLLPDDTSNDNLLE
LPIKKPDTGKSEGEEVEEDLLLAKETQEVGELKINSKGDDMPATRVLKKKKLKINVHRPV
GTRVVFDEEGNTLPPLARLADTSGGADSVQLNKEKVNHRYAELRKNLKLVDKEDKDLDRK
RLKEKRIKEKMKYKRGREEEEEEDEELSGSDGELSGGRVNKKTKIFDSDDDDGEKPKDMA
KEGIAADAISVAEQEELALKLLSSMNS

Transcript Sequence

Gene sequence data has not been registered.